Part 1 obgyn notes Sri Lanka
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    Microbiology
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    TB

    TB

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    ⭐ THE 20% THAT GIVES 80% MARKS

    (If you learn ONLY this box, you can answer almost all TB exam questions.)

    1. Organism: Mycobacterium tuberculosis, acid-fast bacillus (AFB).
    2. Cell wall: Mycolic acids + lipoarabinomannan → waxy wall → acid-fast, slow growth.
    3. Transmission: Airborne droplets; infects macrophages.
    4. Virulence:
      • Cord factor → serpentine cords → inhibits phagolysosome fusion.
      • Sulfolipids → prevent lysosome fusion.
    5. Granuloma formation (caseating):
      • Th1 → IFN-γ → macrophage activation → granulomas.
    6. Primary TB: Ghon focus + hilar LN = Ghon complex.
    7. Reactivation TB: apex of lung (high O₂); hemoptysis, night sweats, weight loss.
    8. Diagnosis:
      • AFB stain (Ziehl-Neelsen), Auramine-rhodamine (fluorescent).
      • Culture: Lowenstein–Jensen (LJ), but slow (3–6 weeks).
      • IGRA (Quantiferon) or Mantoux (PPD) for latent TB.
    9. Treatment: RIPE = Rifampicin + Isoniazid + Pyrazinamide + Ethambutol.
    10. Drug resistance: MDR-TB (INH + RIF resistance); XDR-TB (INH+RIF + fluoroquinolone + injectable resistance).

    This is your 80%-marks block.

    🔬 FULL MICROBIOLOGY — SIMPLE & COMPLETE

    1️⃣ The Organism: Mycobacterium tuberculosis

    • Slender, rod-shaped bacillus
    • Acid-fast (due to mycolic acid)
    • Strict aerobe (prefers apex of lung)
    • Slow growing (divides every 18–24 hrs)
    • Non-motile, non-spore-forming

    Why acid-fast?

    Because of mycolic acids and waxy wall that resists decolorisation by acid.

    Stains

    • Ziehl–Neelsen (red AFB)
    • Auramine–rhodamine (fluorescent, more sensitive)

    2️⃣ Cell Wall Structure (VERY EXAM IMPORTANT)

    Unique TB cell wall contains:

    • Mycolic acids (long fatty acids)
    • Lipoarabinomannan (LAM) → similar to LPS; inhibits macrophages
    • Cord factor (trehalose dimycolate) → serpentine cords
    • Arabinogalactan
    • Peptidoglycan

    Function of TB cell wall

    • Prevents phagolysosome fusion
    • Resistant to drying, disinfectants
    • Explains slow growth
    • Stimulates granuloma formation

    📌 Memory:

    “Mycolic acid = Myco-LONG acid → long survival.”

    3️⃣ Transmission & Initial Infection

    • Spread by airborne droplets
    • Bacteria reach alveoli → taken up by alveolar macrophages

    TB loves high oxygen → apex in reactivation.

    4️⃣ Pathogenesis — How TB Causes Disease

    1. Macrophage ingestion of bacilli
    2. TB survives inside macrophages
    3. Th1 cells activated → IFN-γ release
    4. IFN-γ activates macrophages → killing + granuloma formation
    5. Granuloma = epithelioid cells + Langhans giant cells + caseous necrosis

    5️⃣ Types of TB

    A. Primary TB

    • First infection
    • Occurs in children
    • Usually lower lobe (mid-zone)
    • Forms Ghon focus + hilar nodes → Ghon complex
    • Most recover → latent TB

    B. Latent TB

    • Bacteria dormant in granulomas
    • Non-infectious
    • Detected by PPD or IGRA

    C. Reactivation TB

    • Due to ↓ immunity (HIV, diabetes, steroids)
    • Upper lobes (high O₂)
    • Symptoms:
      • chronic cough
      • hemoptysis
      • fever
      • night sweats
      • weight loss (“consumption”)

    D. Miliary TB

    • Dissemination via bloodstream
    • Millet-seed pattern
    • Affects liver, bone marrow, spleen, meninges

    E. Extrapulmonary TB

    • Meningitis
    • Pott disease (spine)
    • Renal TB
    • Lymphadenitis (scrofula)
    • Pericarditis
    • GI TB

    6️⃣ Diagnosis

    A. Smear microscopy

    • Ziehl–Neelsen (AFB stain)
    • Auramine (fluorescent)

    B. Culture

    • Lowenstein–Jensen medium
    • Takes 3–6 weeks

    C. Molecular tests

    • GeneXpert / CBNAAT
      • Detects TB + rifampicin resistance
      • Rapid (2 hours)

    D. Immunological tests

    ● Mantoux (PPD skin test)

    • Positive if ≥10 mm (or ≥5 mm in high-risk groups)

    ● IGRA (Quantiferon)

    • Detects latent TB
    • Unaffected by BCG vaccination

    7️⃣ Treatment – RIPE Regimen

    Intensive phase:

    • Rifampicin
    • Isoniazid
    • Pyrazinamide
    • Ethambutol
    • Duration: 2 months

    Continuation phase:

    • Rifampicin + Isoniazid
    • Duration: 4 months

    8️⃣ Drug Mechanisms (VERY HIGH-YIELD)

    • Rifampicin: inhibits RNA polymerase
    • Isoniazid (INH): inhibits mycolic acid synthesis
    • Pyrazinamide: works in acidic phagolysosomes
    • Ethambutol: inhibits arabinogalactan synthesis

    9️⃣ Drug Resistance

    MDR-TB:

    • Resistant to INH + Rifampicin

    XDR-TB:

    • Resistant to INH + RIF + fluoroquinolone + injectable (amikacin/kanamycin)

    🔟 Prevention

    • BCG vaccine (live attenuated M. bovis)
    • Good for meningitis in children
    • Not fully protective for pulmonary TB
    • Masks, screening contacts, treating latent TB

    2024 guidline